Computational & structural biology group members

Current members of the lab

See some pics of the group: 2023Dec, 2023Jul, 2022, 2018, 2017

Bruno Contreras Moreira: ORCiD Twitter (funded by ARAID 2007-2018, @EMBL-EBI 2018-2021)
Inmaculada Yruela: ORCiD Twitter
Najla Ksouri (Sept2015-Oct2016, Apr2018-, MSc and PhD co-supervised by Yolanda Gogorcena)
Teshome Dagne Mulugeta (Jan2022-), co-supervised PhD at NMBU
Laura Ruiz Torres (Apr2022-), PhD co-supervised by Antonio Manzaneda at UJaén
Joan Sàrria Álvarez (Mar2024-), PhD co-supervised by Ana Casas

Previous members / visitors

Íñigo Verón Mansilla (Feb2024-Mar2024), undergraduate from USJ, GitHub
Carmen Miravete Bernal (Nov2023-Dic2023), undergraduate from USJ, GitHub
María Ángeles Decena (Sep2018-Dec2023, PhD co-supervised by Pilar Catalán at UZaragoza)
Javier Falcó Martí, intern Master’s student at UZaragoza (Jun2023-Jul2023)
Giuliana Morabito, intern student at UZaragoza (Jun2023-Jul2023)
Gonzalo Díaz Elías (Mar2022-Jan2023), undergraduate from USJ
Nikola Korinkova (Sep2022-Dec2022), visiting PhD student from Palacký University in Olomouc
Ammar Abdalrahem (Oct2021-Oct2022, MSc from IAMZ, GitHub)
Carlos P. Cantalapiedra (Jul-Nov2010,Sep2011-Sep2015,Feb2016-Sep2018, PhD co-directed by A Casas)
Rubén Sancho Cohen (Jan2014-Sep2018, PhD co-directed by Pilar Catalán)
Francesc Montardit Tardá (Sept2017-Oct2018, MSc co-directed by Y Gogorcena)
Valerie de Anda Torres (Jul2014, Oct2016-Aug2018, PhD at Inst Ecología-UNAM, México)
Álvaro Rodríguez del Río (Feb2018-Jul2018, MSc RU Groningen, local supervisors: B Contreras & AM Casas, see bitscore normalization benchmark)
Uriel Alonso Hurtado Páez (Jul2017-Nov2017, PhD Candidate at Universidad Nacional, Colombia)
Teshome Dagne Mulugeta (Abr2017-May2017,Sept2017-Nov2017), summary
Eduardo Candeal (Abr2016-May2016; Sept2016-Jan2017), employee of BDR diagnostics
María Jesús García-Pereira (Sept2013-Sept2014)
Postdoc contract.
Edgar Fernández Alons (Feb-Dec 2014)
MSc project supervised by I Yruela.
Pablo Vinuesa (Centro de Ciencias Genómicas, México, Jun2014)
Two-week visit as part of bilateral funding E2014MX010.
Edgardo Jofré (UNRC Argentina, Sep2013)
One-month visit as part of bilateral funding PRI-AIBAR-2011-0840.
Anais Ariza Jiménez (Jul-Aug2013)
Student project on ‘Transcriptional regulation of chloroplast genes’, supported by CSIC JAE-intro program.
Daniela Medeot (UNRC Argentina, Jun-Jul2013)
One-month visit as part of bilateral funding PRI-AIBAR-2011-0840.
Álvaro Sebastián (Sept2009-Dec2012)
Postdoc hired in STREG project, founder of sixthresearcher.
Walter Ferrari (UNRC Argentina, Aug-Oct2012)
Two-month visit as part of bilateral funding PRI-AIBAR-2011-0840.
Fernando Rossi (UNRC Argentina, Jun2012)
One-month visit as part of bilateral funding PRI-AIBAR-2011-0840.
Lorenz Bülow (TU Braunschweig, Aug-Sep2011)
Short-term visit during the STREG project.
José Ramón Blas Pastor (Universidad de Castilla La Mancha, Mar2011)
Short visit to learn sequence analysis skills for his studies on molecular evolution, funded by UCLM.
David Zamorano (Oct2009-Jun2010)
Postgraduate topic on ‘Structural and functional prediction of proteins: analysis of protein-DNA interactions’, funded by UNAM.
Gökhan Karakülah (Nov2008-Jun2009)
First year of PhD in Bioinformatics, funded by CSIC JAE predoc program.
Odín Morón García (Jul-Oct2008)
Student project on ‘Evaluation of methods of gene orthology assignment’, funded by CSIC Introduction to research program.

Current collaborators

Ana Casas, Ernesto Igartua, Estación Experimental de Aula Dei-CSIC
Pilar Catalán, EPS Huesca, Universidad de Zaragoza
Antonio Manzaneda, Universidad de Jaén
Pablo Vinuesa, Centro de Ciencias Genómicas-UNAM, México
Milagros Medina, Patricia Ferreira, Marta Martínez Júlvez, BIFI-Universidad de Zaragoza
Jesús I Martínez, ICMA-CSIC-Universidad de Zaragoza
Inés García-Rubio, Centro Universitario de la Defensa, Zaragoza
the RSAT team
the ELIXIR Plant community
Ensembl Plants, Gramene, UniProt and the partners of PanOryza
the partners of SOIL O-LIVE, GENDIBAR and RECOBAR