Tuning promoter boundaries improves regulatory motif discovery in non-model plants: the peach example

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Modules Gene profiles Motif-discovery
Oligos | Dyads 		Motif-scanning
M1 Matrix.tf     Annotation Matrix.tf     Annotation
M2 (AT)_homopolymer (AT)_homopolymer ---
M3 --- --- ---
M4 Matrix.tf     Annotation ---
M5 Matrix.tf     Annotation Matrix.tf     Annotation
M6 Matrix.tf     Annotation Matrix.tf     Annotation
M7 Matrix.tf     Annotation Matrix.tf     Annotation
M9 Matrix.tf     Annotation Matrix.tf     Annotation
M10 --- --- ---
M11 Matrix.tf     Annotation Matrix.tf     Annotation
M18 Matrix.tf     Annotation ---
M21 Matrix.tf     Annotation Matrix.tf     Annotation
M24 --- --- ---
M25 --- --- ---
M28 --- --- ---
M41 --- Matrix.tf     Annotation
M43 Matrix.tf     Annotation ---
M44 Matrix.tf     Annotation Matrix.tf     Annotation